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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST002296
species: Pseudoroegneria spicata
miRNA family: MIR2033
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATTTCTTTACAAAGGGAGTA

miRNA*
 CTCCCTCTGTAGTGATCTA

mismatches: 3
bulges: 2
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pre-miRNA
 TGAAGAATTCCGACCATGCTACTACAGTTATACTCCCTCTGTAGTGATCTAAACGCTCTTATATTTCTTTACAAAGGGAGTATATTTCTGTAGTTGGAGG
AGGGAGGACTT

dot-bracket secondary structure
..(((..((((..((...(((((((((.((((((((((.(((((.(((.(((......))).)))...))))).))))))))))...)))))).))).))
..))))..)))


SIMILARITIES
miRBase tae-MIR1121: 0.000000000001

PMRD ave-miR1120: 0.00000000000002

microPC miR1121: 0.0003		UniProt no hits

RFAM MIR1122: 0.0000000000004		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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