miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Fagus sylvatica, Juglans hindsii x Juglans regia, Quercus petraea, Quercus robur



ABOUT THIS RECORD

ID: MNEST002323
species: Quercus robur
miRNA family: MIR1097
source: miRNEST

Taxonomy by NCBI:
Quercus robur Quercus Fagaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGCCATTGTTGTTGTTGTAG

miRNA*
 GCCATGATAAAAGAGGTTGAG

mismatches: 5
bulges: 0
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pre-miRNA
 TGTGATCAGTAACATGTAGAAGGCCATGATAAAAGAGGTTGAGTTAGCCATTGTTGTTGTTGTAGCTAGATGTTGCTCTTGTTT

dot-bracket secondary structure
.......((((((((.(((...((.(((((((.((.(((((...))))).)).))))))).))..))).)))))))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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