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Species belonging to selected taxon:

Brassica napus, Brassica oleracea var. alboglabra, Brassica rapa, Raphanus raphanistrum, Raphanus raphanistrum subsp. landra, Raphanus raphanistrum subsp. maritimus, Raphanus sativus, Raphanus sativus var. oleiformis, Thellungiella halophila, Arabidopsis thaliana, Brassica oleracea



ABOUT THIS RECORD

ID: MNEST002389
species: Raphanus sativus
miRNA family: MIRf519
source: miRNEST

Taxonomy by NCBI:
Raphanus sativus Raphanus Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTATAGCATCATGAGCAATCA

miRNA*
 ACTGCTCGTGATGTTATATCA

mismatches: 1
bulges: 0
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pre-miRNA
 GTACTTAATTTGTATAGCATCATGAGCAATCAGTCTTGGAAACTCAGTTGTTGGTTTCTCAATAGATTGACTGCTCGTGATGTTATATCATTTTCTCT

dot-bracket secondary structure
...........(((((((((((((((((.(((((((.(((((((........)))))))....))))))).)))))))))))))))))..........


SIMILARITIES
miRBase no hits

PMRD ath-miRf11142-akr: 2e-27

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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