miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Raphanus raphanistrum, Raphanus raphanistrum subsp. landra, Raphanus raphanistrum subsp. maritimus, Raphanus sativus, Raphanus sativus var. oleiformis

ABOUT THIS RECORD

ID: MNEST002395
species: Raphanus sativus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Raphanus sativus Raphanus Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTATCATCATCATCATCTTTT

miRNA*
TAGATATGCTGATGATAGA

mismatches: 4
bulges: 2

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pre-miRNA
ATATATTGGTCTTATCATCATCATCATCTTTTTTTCTATAGATATGCTGATGATAGATGGAAAGC

dot-bracket secondary structure
........((((.(((((((.(((.((((..........))))))).))))))))))).......

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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