miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Brassica napus, Brassica oleracea var. alboglabra, Brassica rapa, Brassica oleracea



ABOUT THIS RECORD

ID: MNEST000244
species: Brassica napus
miRNA family: MIRf519
source: miRNEST

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATATAGCATCATGAGCAATCA

miRNA*
 ACTGCTCGTGATGTTATATCA

mismatches: 1
bulges: 0
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pre-miRNA
 AAGTACTTTGTATATAGCATCATGAGCAATCAGCCTTGGAAACTCAATTTGTTGGTTTCTCAGTAGACTGACTGCTCGTGATGTTATATCATTTTCTCT

dot-bracket secondary structure
........((.(((((((((((((((((.((((.((.((((((.(((....)))))))))....)).)))).)))))))))))))))))))........


SIMILARITIES
miRBase no hits

PMRD ath-miRf11142-akr: 2e-39

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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