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Species belonging to selected taxon:
Gallus gallus
,
Taeniopygia guttata
,
Meleagris gallopavo
,
Lonchura striata domestica
ABOUT THIS RECORD
ID:
MNEST025983
species:
Gallus gallus
miRNA family:
mir-193
source:
miRBase, original name:
gga-mir-193b
(
MI0003698
)
Taxonomy by NCBI:
Gallus gallus
Gallus
Phasianinae
Phasianidae
Galliformes
Neognathae
Aves
Coelurosauria
Theropoda
Saurischia
Dinosauria
Archosauria
Sauria
Sauropsida
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AACTGGCCCACAAAGTCCCGCTTT
miRNA*
GTCGGGGTTTTGGGGGCGAGATGA
mismatches:
6
bulges:
0
View larger
pre-miRNA
GTGGTTCCAGA
GTCGGGGTTTTGGGGGCGAGATGA
GCTTATGTTTTATCC
AACTGGCCCACAAAGTCCCGCTTT
TGGTGGTCA
dot-bracket secondary structure
.((..((((((
(.((((..((((.((((.((.(((
((....))).....)
).)).)))).))))..)))).)))
))).)..))
SIMILARITIES
miRBase
tgu-mir-193a
:
2e-35
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-193: 1e-40
Identical with:
tgu-mir-193a
from miRBase (
MNEST026490
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record