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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST002667
species: Solanum melongena
miRNA family: MIR398
source: miRNEST

Taxonomy by NCBI:
Solanum melongena Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTGTTCTCAGGTCGCCCCTG

miRNA*
 GGGGCAACTTGAGATCACATG

mismatches: 2
bulges: 0
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pre-miRNA
 GAATCTTCTAATATTGGTGGAAGTATTCAATAGGGGCAACTTGAGATCACATGTTATTTTTTTTTTTTTCTGATGATTCTATATTTCTAACATGTGTTCT
CAGGTCGCCCCTGTCGAATTATTTTTTCACCTAATAATGAAT

dot-bracket secondary structure
.....(((...((((((((((((.((((.((((((((.((((((((.(((((((((...............................))))))))).)))
))))).)))))))).))))....)))))))).))))..))).


SIMILARITIES
miRBase ptc-MIR398c: 0.0000004

PMRD ptc-miR398c: 0.0000004

microPC miR398: 0.0000004		UniProt no hits

RFAM MIR398: 0.000008		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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