miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ipomoea batatas, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST002676
species: Solanum torvum
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Solanum torvum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTTCATCATCATCATCTTCA

miRNA*
 ATTATGATGATTTGAAATCG

mismatches: 5
bulges: 1
View larger
pre-miRNA
 TATGATTGTTGTTATGGTGATGATTATGATGATTTGAAATCGACGACCCTCCCATCGTTGCCGGCGCCGGATTTGGCGGCGGCAACAACCTTGTACTAGC
TGAAACAACAACGTTTGTTGTTGTGGTGGTTGTCGTCGTTGTCTCTTCATCATCATCATCTTCATCATCGTTTACACTTTCTT

dot-bracket secondary structure
...((..((.((.((((((((((..((((((((.((((..(((((((.....((..(((((((.(((((....))))).))))))).....))...((((
((..((((((((....))))))))..))))))..)))))))....))))..))))))))..))))))))))..))))..))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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Liczniki na strone;