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Species belonging to selected taxon:

Solanum torvum



ABOUT THIS RECORD

ID: MNEST002677
species: Solanum torvum
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Solanum torvum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGCCAAGGATGACTTGCCTA

miRNA*
 GGCAGTTATCCTGGCTATA

mismatches: 0
bulges: 2
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pre-miRNA
 CTGAAATGTTAAGAAGAGAGACCTTACCTGAAGTGAAGAGTCTTTGTTTATTAGCCAAGGATGACTTGCCTACATACCTTTCCTCCCACAAGGATATTAT
TTCTCTAATTTCCCTTTTGGGGTTGCTATGCTAGGCAGTTATCCTGGCTATATTGACAGGCTATTCCTCATCATGTTAGGCCTCTTCTTCTCATAGTTAT


dot-bracket secondary structure
.....(((..((((((((...(((.((.(((((.(((.((((..((((...((((((.((((((((.(((((((((.......(((((.((((..((((.
.....))))...)))).)))))....)))).)))))))))))))))))))....)))))))).)))))..))).)).))).))))))))..)))......



SIMILARITIES
miRBase tcc-MIR169g: 0.0000002

PMRD aqc-miR169a: 0.0000007

microPC miR169: 0.00004		UniProt no hits

RFAM MIR169_5: 0.0000008		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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