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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST002694
species: Taraxacum kok-saghyz
miRNA family: MIR171
source: miRNEST

Taxonomy by NCBI:
Taraxacum kok-saghyz Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGAGCCGAACCAATATCACT

miRNA*
 GTGGTATTGGTACGGTTCATCA

mismatches: 2
bulges: 1
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pre-miRNA
 GAAGCTCCACAACGAAGTCCTGTGACAGAGAAATAGACACGGCGTGGTATTGGTACGGTTCATCAACTTTACTTCTTTGTATGTTTTGGAGTAGCCTTGA
CATGAGCCGAACCAATATCACTCTTGTATGTTTCTTTGAAGAAAACATGGCTTTCTTTACCG

dot-bracket secondary structure
.............((((((.(((..((((((((((.(((.((.(((((((((((.(((((((((((..(((((((............)))))))..))))
..))))))).))))))))))))).))).))))))))))......))).))))))........


SIMILARITIES
miRBase vvi-MIR479: 0.00000003

PMRD vvi-miR479: 0.00000003

microPC miR171: 0.0001		UniProt no hits

RFAM MIR171_2: 0.00000001		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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