ABOUT THIS RECORDspecies: Taraxacum officinale
miRNA family: MIR1134
source: miRNEST
Taxonomy by NCBI:
Taraxacum officinale Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAACAACAACAAGAACAAGCT miRNA* ATTGTTTCTGCTGTTCTTGGT mismatches: 4 bulges: 0 |
pre-miRNA
AATTCCAGATTTTAGTCGGATTGTTTCTGCTGTTCTTGGTTCCTTTGGAATAGCCAATGCTGGAAGTGGTGGTGAAGCAGTAGATTTGCAACAACACATC
TCTGAGAGACTTTCACGGATACCTGGTCTGAATGAAATAAGAAGTTCCACTTCCAACGGACAACAACAACAAGAACAAGCTGAAGATGCTTCCGGAA
dot-bracket secondary structure
..((((.((...((.((((.((((((.((.((((.(((..(((.((((((.(((....)))(((((((...((...((((.....)))).))..))).((
((...)))).((((((((((.....)))))..))))).......))))..)))))).)))))).)))).)).)))))).))))...))..)).))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AATTCCAGATTTTAGTCGGATTGTTTCTGCTGTTCTTGGTTCCTTTGGAATAGCCAATGCTGGAAGTGGTGGTGAAGCAGTAGATTTGCAACAACACATC
TCTGAGAGACTTTCACGGATACCTGGTCTGAATGAAATAAGAAGTTCCACTTCCAACGGACAACAACAACAAGAACAAGCTGAAGATGCTTCCGGAA
dot-bracket secondary structure
..((((.((...((.((((.((((((.((.((((.(((..(((.((((((.(((....)))(((((((...((...((((.....)))).))..))).((
((...)))).((((((((((.....)))))..))))).......))))..)))))).)))))).)))).)).)))))).))))...))..)).))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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