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Species belonging to selected taxon:

Theobroma cacao



ABOUT THIS RECORD

ID: MNEST002724
species: Theobroma cacao
miRNA family: MIR2910
source: miRNEST

Taxonomy by NCBI:
Theobroma cacao Theobroma Byttnerioideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGTTGGTGGAGTGATTTGTC

miRNA*
 CCTTAACCTGCTAACTAGC

mismatches: 4
bulges: 2
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pre-miRNA
 ATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGCTTAATTGCGATAACGAACGAGACCTTAACCTGCTAACTAGCCCGTATTG

dot-bracket secondary structure
..(((......((((((((((.((.....((((.....................))))....))))))))))))))).......


SIMILARITIES
miRBase no hits

PMRD peu-miR2910: 0.0000000000003

microPC no hits		UniProt no hits

RFAM SSU_rRNA_eukarya: 3e-41		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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