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Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Theobroma cacao



ABOUT THIS RECORD

ID: MNEST002741
species: Theobroma cacao
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Theobroma cacao Theobroma Byttnerioideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCATCATCA

miRNA*
 ATGAAGAAGATGGAGAGGATA

mismatches: 5
bulges: 0
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pre-miRNA
 CTCCTTGCTTTGAATGAAGACGATGAAGAAGATGGAGAGGATAAAGAAACGCCATCAATATCATCATCATCATCATCATCATCATCATCAAATGATAAAC


dot-bracket secondary structure
........(((((.(((.((.(((((.((.(((((.((.((((..((.......))..)))).)).))))).)).))))).)).))))))))........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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