miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST002742
species: Trifolium pratense
miRNA family: MIR2119
source: miRNEST

Taxonomy by NCBI:
Trifolium pratense Trifolium Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCAAAGGGAGGTGTGGAGTAG

miRNA*
 ACTCCGTACCTTTCTTTTATT

mismatches: 2
bulges: 0
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pre-miRNA
 TTACTCCTATACTTCATTTTTTATACTAAAATACTCCGTACCTTTCTTTTATTGGAAAGTAAGAGAGACAAAAAAAGTGCCTATTTCTCTTGGTTTTTTC
AATCAAAGGGAGGTGTGGAGTAGAGGTGTCAGAAGTAAAGTATAAGAATAAT

dot-bracket secondary structure
(((.((.(((((((.((((((.(((((....((((((((((((((((((.((((((((((((((((((...............)))))))))..))))))
))).))))))))))))))))))..))))).)))))).))))))).)).))).


SIMILARITIES
miRBase mtr-MIR2119: 0.0000005

PMRD mtr-miR2119: 0.0000005

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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