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Species belonging to selected taxon:

Medicago sativa, Trifolium pratense, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST002753
species: Trifolium pratense
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Trifolium pratense Trifolium Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTGGGACAGAGAGAGTAAT

miRNA*
 TACTCCCTCTGTCCCAAAATA

mismatches: 3
bulges: 0
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pre-miRNA
 CCTATTAAGTACTCCCTCTGTCCCAAAATATAAGCAAAAAGGGGTCAACAAAAGTGAATATATTTGGACTAAATTTTAAACCAAATTCATCAACTTTCGT
TGACCACATTTTGCTTATATTTTGGGACAGAGAGAGTAATATATTA

dot-bracket secondary structure
.........(((((.((((((((((((((((((((((((...(((((((.(((((......((((((.............))))))......))))).))
)))))...)))))))))))))))))))))))).)))))........


SIMILARITIES
miRBase osa-MIR1862d: 0.00003

PMRD osa-miRf11090-akr: 0.0000005

microPC miR1439: 0.0001		UniProt no hits

RFAM MIR1122: 0.000000000000002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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