ABOUT THIS RECORDspecies: Macaca mulatta
miRNA family: mir-590
source: miRBase, original name: mml-mir-590 (MI0007855)
Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGCTTATTCATAAAAGTGCAG miRNA* GTAATTTTATGTATAAGCTGGT mismatches: 3 bulges: 0 |
pre-miRNA
TAGCCAGTCAGAAATGAGCTTATTCATAAAAGTGCAGTATGGTGGAGTCAGTCTGTAATTTTATGTATAAGCTGGTCTCTAACTGAAACGTGCAGCA
dot-bracket secondary structure
....((((.(((.((.(((((((.(((((((.(((((..(((.....)))..))))).))))))).))))))).)).))).))))............
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"
TAGCCAGTCAGAAATGAGCTTATTCATAAAAGTGCAGTATGGTGGAGTCAGTCTGTAATTTTATGTATAAGCTGGTCTCTAACTGAAACGTGCAGCA
dot-bracket secondary structure
....((((.(((.((.(((((((.(((((((.(((((..(((.....)))..))))).))))))).))))))).)).))).))))............
SIMILARITIES| miRBase mml-mir-590: 3e-50 PMRD no hits microPC no hits | UniProt no hits RFAM mir-590: 6e-49 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"
