ABOUT THIS RECORDspecies: Macaca nemestrina
miRNA family: mir-15
source: miRBase, original name: mne-mir-16 (MI0002950)
Taxonomy by NCBI:
Macaca nemestrina Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGCAGCACGTAAATATTGGCG miRNA* CCAGTATTAACTGTGCTGCTGAA mismatches: 2 bulges: 1 |
pre-miRNA
CGTCAGCAGTGCCTTAGCAGCACGTAAATATTGGCGTTAAGATTCTAAAATTATCTCCAGTATTAACTGTGCTGCTGAAGTAAGGTTGAC
dot-bracket secondary structure
)((((((..(((.((((((((((((.((((((((.(.(((..........))).).)))))))).)).)))))))))).)))..))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CGTCAGCAGTGCCTTAGCAGCACGTAAATATTGGCGTTAAGATTCTAAAATTATCTCCAGTATTAACTGTGCTGCTGAAGTAAGGTTGAC
dot-bracket secondary structure
)((((((..(((.((((((((((((.((((((((.(.(((..........))).).)))))))).)).)))))))))).)))..))))))
SIMILARITIES| miRBase age-mir-16: 2.0E-45 PMRD no hits microPC no hits | UniProt no hits RFAM 6mir-16: 4.0E-37 |
Identical with: ssc-mir-16-2 from miRBase (MNEST033914), ggo-mir-16 from miRBase , ptr-mir-16-1 from miRBase , cfa-mir-16-1 from miRBase , ppy-mir-16 from miRBase , sla-mir-16 from miRBase , ppa-mir-16 from miRBase , mml-mir-16-1 from miRBase , age-mir-16 from miRBase , hsa-mir-16-1 from miRBase , eca-mir-16-2 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
