ABOUT THIS RECORDspecies: Macaca nemestrina
miRNA family: mir-25
source: miRBase, original name: mne-mir-92 (MI0003122)
Taxonomy by NCBI:
Macaca nemestrina Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATTGCACTTGTCCCGGCCTGT miRNA* GGGTGGGGATTTGTTGCATTACT mismatches: 5 bulges: 1 |
pre-miRNA
ATCATCCCTGGGTGGGGATTTGTTGCATTACTTGTGTTCTATATAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA
dot-bracket secondary structure
)((.(((.(((((.(((((..((.(((.(((((((((...)))).))))).)))))..))))).))))).))).))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
ATCATCCCTGGGTGGGGATTTGTTGCATTACTTGTGTTCTATATAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA
dot-bracket secondary structure
)((.(((.(((((.(((((..((.(((.(((((((((...)))).))))).)))))..))))).))))).))).))
SIMILARITIES| miRBase age-mir-92-2: 3.0E-37 PMRD no hits microPC no hits | UniProt no hits RFAM 2mir-92: 2.0E-26 |
Identical with: hsa-mir-92a-2 from miRBase (MNEST028406), age-mir-92-2 from miRBase , ppa-mir-92-2 from miRBase , ggo-mir-92-2 from miRBase , lla-mir-92-2 from miRBase , sla-mir-92-2 from miRBase , mml-mir-92a-2 from miRBase , ppy-mir-92-2 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
