miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Botryococcus braunii, Coccomyxa sp. C-169, Volvox carteri, Chlamydomonas reinhardtii



ABOUT THIS RECORD

ID: MNEST002831
species: Volvox carteri
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Volvox carteri Volvox Volvocaceae Chlamydomonadales Chlorophyceae Chlorophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCATCATCATCATCATCATCA

miRNA*
CAGGTGGTGCTGGTGGTGGTT

mismatches: 5
bulges: 0

View larger
pre-miRNA
GCTAGTGCAGGTGGTGCTGGTGGTGGTTGGTCACGTCGTGGGTTAGTCCTTTGCTTTGGTCCTTCGACACAGAGGAGGTGTGAAGTCCAAGCAAAGACTT
TTCCTGTGATGTGTATGAAAGCCATCTACTGTTGCAGAGTCTTGTTAGTGATAGGACCTGCGTGCACCGGTTGCATGCTGACCATCATCATCATCATCAT
CA
TCATCATCA


dot-bracket secondary structure
((....)).(((((((.(((((((((((((((((((((((((..((((.(((((((.((..((((.((((.......)))))))).))))))))))))).
..))))))))))).(((..((((......(((.((((.((((((((...))))))))))))..)))..)))).))))))))))))))))).)))))))..
..
.........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





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