miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Curcuma longa, Musa ABB Group, Zingiber officinale



ABOUT THIS RECORD

ID: MNEST002842
species: Zingiber officinale
miRNA family: MIR1525
source: miRNEST

Taxonomy by NCBI:
Zingiber officinale Zingiber Zingiberaceae Zingiberales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAGTTAATTAAGTTTTTATG

miRNA*
 AGGAAATTTGATAACTGTTT

mismatches: 5
bulges: 1
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pre-miRNA
 CTAGGGATCCTTGCGAATAAGTTGAATTATGATTTGTTCTTTGAGTTAATTAAGTTTTTATGTGTTAAGGAAATTTGATAACTGTTTATAAGGACACTTG
ATACTGTGTTTGCTATTTAGTTGTG

dot-bracket secondary structure
..(((...)))...((((((((((.....))))))))))....(((((.((((((((((.........))))))))))))))).........(((((...
.....))))).(((....)))....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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