ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-412
source: miRBase, original name: hsa-mir-412 (MI0002464)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTTCACCTGGTCCACTAGCCGT miRNA* GGATGGTCGACCAGTTGGAAAGTAA mismatches: 3 bulges: 2 |
pre-miRNA
CTGGGGTACGGGGATGGATGGTCGACCAGTTGGAAAGTAATTGTTTCTAATGTACTTCACCTGGTCCACTAGCCGTCCGTATCCGCTGCAG
dot-bracket secondary structure
...((((((..((((((.((((.((((((.(((..((((((((....)))).))))))).)))))).)))).)))))))))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Altuvia Y, Landgraf P, Lithwick G, Elefant N, Pfeffer S, Aravin A, Brownstein MJ, Tuschl T, Margalit H, Nucleic Acids Res. 33:2697-2706(2005)., "Clustering and conservation patterns of human microRNAs"
CTGGGGTACGGGGATGGATGGTCGACCAGTTGGAAAGTAATTGTTTCTAATGTACTTCACCTGGTCCACTAGCCGTCCGTATCCGCTGCAG
dot-bracket secondary structure
...((((((..((((((.((((.((((((.(((..((((((((....)))).))))))).)))))).)))).)))))))))))).......
SIMILARITIES| miRBase mml-mir-412: 1e-46 PMRD no hits microPC no hits | UniProt no hits RFAM mir-412: 1e-43 |
Identical with: ppy-mir-412 from miRBase (MNEST030996) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Altuvia Y, Landgraf P, Lithwick G, Elefant N, Pfeffer S, Aravin A, Brownstein MJ, Tuschl T, Margalit H, Nucleic Acids Res. 33:2697-2706(2005)., "Clustering and conservation patterns of human microRNAs"
