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Species belonging to selected taxon:

Capsicum annuum



ABOUT THIS RECORD

ID: MNEST002888
species: Capsicum annuum
miRNA family: MIR164
source: miRNEST

Taxonomy by NCBI:
Capsicum annuum Capsicum Capsiceae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAGAAGCAGGGCACGTGCA

miRNA*
 CACGTGTTCTGCTTCCCCAAC

mismatches: 1
bulges: 0
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pre-miRNA
 GTAGCTCTAGTTGGAGAAGCAGGGCACGTGCAAGTTCTTGAATTTGAAGATATGTGTATTTTTCATGCATGAATCTTGCACGTGTTCTGCTTCCCCAACC
TGAGTTT

dot-bracket secondary structure
...((((..(((((.((((((((((((((((((((((.((....((((((.........))))))..)).))).))))))))))))))))))).))))).
.))))..


SIMILARITIES
miRBase tcc-MIR164b: 0.00000000009

PMRD gma-miR164: 0.00000008

microPC miR164: 0.00002		UniProt no hits

RFAM MIR164: 0.0000004		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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