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Species belonging to selected taxon:

Actinidia chinensis, Actinidia deliciosa, Actinidia eriantha, Antirrhinum majus, Barnadesia spinosa, Cichorium intybus, Coffea canephora, Fraxinus excelsior, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Ipomoea batatas, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Panax ginseng, Parthenium argentatum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Taraxacum kok-saghyz, Taraxacum officinale, Triphysaria pusilla, Triphysaria versicolor, Zinnia violacea, Capsicum annuum, Carthamus tinctorius, Catharanthus roseus, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST002888
species: Capsicum annuum
miRNA family: MIR164
source: miRNEST

Taxonomy by NCBI:
Capsicum annuum Capsicum Capsiceae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAGAAGCAGGGCACGTGCA

miRNA*
 CACGTGTTCTGCTTCCCCAAC

mismatches: 1
bulges: 0
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pre-miRNA
 GTAGCTCTAGTTGGAGAAGCAGGGCACGTGCAAGTTCTTGAATTTGAAGATATGTGTATTTTTCATGCATGAATCTTGCACGTGTTCTGCTTCCCCAACC
TGAGTTT

dot-bracket secondary structure
...((((..(((((.((((((((((((((((((((((.((....((((((.........))))))..)).))).))))))))))))))))))).))))).
.))))..


SIMILARITIES
miRBase tcc-MIR164b: 0.00000000009

PMRD gma-miR164: 0.00000008

microPC miR164: 0.00002		UniProt no hits

RFAM MIR164: 0.0000004		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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