ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-743
source: miRBase, original name: hsa-mir-888 (MI0005537)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTCAAAAAGCTGTCAGTCA miRNA* ACTGACACCTCTTTGGGTGAA mismatches: 2 bulges: 0 |
pre-miRNA
GGCAGTGCTCTACTCAAAAAGCTGTCAGTCACTTAGATTACATGTGACTGACACCTCTTTGGGTGAAGGAAGGCTCA
dot-bracket secondary structure
(((..(.((.((((((((.((.((((((((((...........)))))))))).)).)))))))).)).)..)))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing"
GGCAGTGCTCTACTCAAAAAGCTGTCAGTCACTTAGATTACATGTGACTGACACCTCTTTGGGTGAAGGAAGGCTCA
dot-bracket secondary structure
(((..(.((.((((((((.((.((((((((((...........)))))))))).)).)))))))).)).)..)))..
SIMILARITIES| miRBase ppy-mir-888: 5e-36 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing"
