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Species belonging to selected taxon:
Mus musculus
,
Sus scrofa
,
Bos taurus
,
Rattus norvegicus
,
Gallus gallus
,
Canis lupus familiaris
,
Ovis aries
,
Macaca fascicularis
,
Anolis carolinensis
,
Trichosurus vulpecula
,
Papio anubis
,
Homo sapiens
,
Taeniopygia guttata
,
Peromyscus maniculatus bairdii
,
Pongo abelii
,
Ursus americanus
,
Equus caballus
,
Oryctolagus cuniculus
,
Macaca nemestrina
,
Cavia porcellus
,
Bos indicus
,
Meleagris gallopavo
,
Lonchura striata domestica
,
Bos sp.
,
Macropus eugenii
,
Peromyscus polionotus subgriseus
,
Capra hircus
,
Pan troglodytes verus
,
Macaca mulatta
ABOUT THIS RECORD
ID:
MNEST029039
species:
Homo sapiens
miRNA family:
mir-940
source:
miRBase, original name:
hsa-mir-940
(
MI0005762
)
Taxonomy by NCBI:
Homo sapiens
Homo
Homininae
Hominidae
Hominoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAGGCAGGGCCCCCGCTCCCC
miRNA*
CCCCAGGAGCGGGGCCTGGGCAGCCC
mismatches:
4
bulges:
7
View larger
pre-miRNA
GTGAGGTGTGGGCCCGG
CCCCAGGAGCGGGGCCTGGGCAGCCC
CGTGTGTTGAGGAAGG
AAGGCAGGGCCCCCGCTCCCC
GGGCCTGACCCCAC
dot-bracket secondary structure
(((.(((.(((((((((
.....((((((((((((..((..(((
(.........))..))
...)).))).)))))))))))
)))))))))).)))
SIMILARITIES
miRBase
mml-mir-940
:
5e-46
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-940: 8e-45
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
cloned
deep sequencing data evidence
references
[
1
] Lui WO, Pourmand N, Patterson BK, Fire A,
Cancer Res. 67:6031-6043(2007).
,
"Patterns of known and novel small RNAs in human cervical cancer"