miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus, Canis lupus familiaris, Ovis aries, Macaca fascicularis, Papio anubis, Homo sapiens, Peromyscus maniculatus bairdii, Pongo abelii, Ursus americanus, Equus caballus, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Bos indicus, Bos sp., Peromyscus polionotus subgriseus, Capra hircus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST029051
species: Homo sapiens
miRNA family: mir-1182
source: miRBase, original name: hsa-mir-1182 (MI0006275)

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GAGGGTCTTGGGAGGGATGTGAC

miRNA*
 CTCCTCCCTCTCCAGCAGCGACTGGATTCTG

mismatches: 2
bulges: 8
View larger
pre-miRNA
 GGGACTTGTCACTGCCTGTCTCCTCCCTCTCCAGCAGCGACTGGATTCTGGAGTCCATCTAGAGGGTCTTGGGAGGGATGTGACTGTTGGGAAGCCC

dot-bracket secondary structure
(((.(((.(((..((..(((.(.((((((.((((....((((...(((((((.....))))))))))))))))))))).).))).))))).))))))


SIMILARITIES
miRBase ptr-mir-1182: 1e-49

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits

Identical with: ptr-mir-1182 from miRBase (MNEST030633)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned

references
[1] Subramanian S, Lui WO, Lee CH, Espinosa I, Nielsen TO, Heinrich MC, Corless CL, Fire AZ, van de Rijn M, Oncogene. 27:2015-2026(2008)., "MicroRNA expression signature of human sarcomas"



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