miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002907
species: Carthamus tinctorius
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Carthamus tinctorius Carthamus Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCATCATCC

miRNA*
 ATGAATATGATGATGTTGCAAC

mismatches: 5
bulges: 1
View larger
pre-miRNA
 ACATCCCTTTCGAATGAATATGATGATGTTGCAACTTCTCCTCTAGTCTTCATTCGTTTATCAGCTTTCTCCAATTCCAAGCATGGCCAGTTCGTTGTGG
ATGCCGCAATTAAGATTTGCTTCTCCACAAGTGGAACCTAAGTTTTGCCGGAGTCATGTACGATTATATGGTGTTCATCATCATCATCATCATCCTCAAT
CGTCT

dot-bracket secondary structure
...........((((((..(((((((((.((.(((....((............((((....((.....((((........(((.(((..((((.((((((
(....((((.......))))...)))))))...))))....))).))).))))...)).))))......)).))))).)))))))))..))))..))...
.....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




Liczniki na strone;