miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor

ABOUT THIS RECORD

ID: MNEST002915
species: Cenchrus ciliaris
miRNA family: MIRf261
source: miRNEST

Taxonomy by NCBI:
Cenchrus ciliaris Cenchrus Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
AGCTAGAAACTCCCCCAAACA

miRNA*
TTTGGGGGAGCTTCCCCAGCTTT

mismatches: 2
bulges: 2

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pre-miRNA
TTCTAGGCCCTGTTTGGGGGAGCTTCCCCAGCTTTTGCTTCTCCCAGAAGCTCAAAAAGCTAGAAACTCCCCCAAACAGGGACTATG

dot-bracket secondary structure
.....(((((((((((((((((.(((...(((((((((((((...))))))...))))))).))).))))))))))))))).))...

SIMILARITIES

miRBase no hits

PMRD osa-miRf11106-akr: 0.00006

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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