ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-1915
source: miRBase, original name: hsa-mir-1915 (MI0008336)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCCCAGGGCGACGCGGCGGG miRNA* TGCCTTGCTGCCCGGGCC mismatches: 2 bulges: 2 |
pre-miRNA
TGAGAGGCCGCACCTTGCCTTGCTGCCCGGGCCGTGCACCCGTGGGCCCCAGGGCGACGCGGCGGGGGCGGCCCTAGCGA
dot-bracket secondary structure
..((.((((((.(((((((.((.((((((((((.(((....))))))))..))))).)).))))))))))))))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Bar M, Wyman SK, Fritz BR, Qi J, Garg KS, Parkin RK, Kroh EM, Bendoraite A, Mitchell PS, Nelson AM, Ruzzo WL, Ware C, Radich JP, Gentleman R, Ruohola-Baker H, Tewari M, Stem Cells. 26:2496-2505(2008)., "MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries"
TGAGAGGCCGCACCTTGCCTTGCTGCCCGGGCCGTGCACCCGTGGGCCCCAGGGCGACGCGGCGGGGGCGGCCCTAGCGA
dot-bracket secondary structure
..((.((((((.(((((((.((.((((((((((.(((....))))))))..))))).)).))))))))))))))).....
SIMILARITIES| miRBase ppy-mir-1915: 2e-35 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Bar M, Wyman SK, Fritz BR, Qi J, Garg KS, Parkin RK, Kroh EM, Bendoraite A, Mitchell PS, Nelson AM, Ruzzo WL, Ware C, Radich JP, Gentleman R, Ruohola-Baker H, Tewari M, Stem Cells. 26:2496-2505(2008)., "MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries"
