ABOUT THIS RECORDspecies: Centaurea maculosa
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATTGTCATCATCATCATCA miRNA* GTGGTGGCTAATGGCAAGGAAC mismatches: 5 bulges: 1 |
pre-miRNA
AGACATACCTGTGGTGGCTAATGGCAAGGAACATATTGATGTATCATTGTCATCATCATCATCATTACCAG
dot-bracket secondary structure
..........(((((((...(((((((.((((((....)))).)).)))))))..))))))).........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AGACATACCTGTGGTGGCTAATGGCAAGGAACATATTGATGTATCATTGTCATCATCATCATCATTACCAG
dot-bracket secondary structure
..........(((((((...(((((((.((((((....)))).)).)))))))..))))))).........
SIMILARITIES| miRBase bna-MIR166b: 0.0002 PMRD bna-miR166b: 0.0002 microPC no hits | UniProt no hits RFAM mir-598: 0.000004 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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