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Species belonging to selected taxon:

Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002931
species: Centaurea maculosa
miRNA family: miR162
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAGTCAGCGGTTCATCGAT

miRNA*
 CGATAAACCTCTGCATCCAGT

mismatches: 4
bulges: 0
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pre-miRNA
 TTGTGCGTTTGGTGGAGTTCATTGGAGTCAGCGGTTCATCGATCAGTTCCTTTAACGAGCATATGAACAAGAGAGAGTGTAAAAGAGGAATCGATCGATA
AACCTCTGCATCCAGTGTCCACCCCTACCTGCCTT

dot-bracket secondary structure
..(((.((..((((((...(((((((..(((.((((.(((((((.((((((((.....((((..............))))...)))))))).))))))).
)))).)))..)))))))))))))...)).)))...


SIMILARITIES
miRBase osa-MIR162a: 0.0000000004

PMRD osa-miR162a: 0.0000000004

microPC miR162: 5e-22		UniProt no hits

RFAM MIR162_2: 0.000000008		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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