ABOUT THIS RECORDspecies: Centaurea solstitialis
miRNA family: MIRf1580
source: miRNEST
Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGACCAGCTTGGCCATGATA miRNA* CTAATGGTGGAGCTGGTCCAGA mismatches: 5 bulges: 1 |
pre-miRNA
CAGAGCTCATTATGACCAGCTTGGCCATGATACTTTTGAAGCGAGTGCTAATGGTGGAGCTGGTCCAGATGCTGGCA
dot-bracket secondary structure
....(((((((..(((((((((.(((((..(((((.......)))))...))))).)))))))))..))))..))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CAGAGCTCATTATGACCAGCTTGGCCATGATACTTTTGAAGCGAGTGCTAATGGTGGAGCTGGTCCAGATGCTGGCA
dot-bracket secondary structure
....(((((((..(((((((((.(((((..(((((.......)))))...))))).)))))))))..))))..))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
