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Species belonging to selected taxon:

Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002955
species: Centaurea solstitialis
miRNA family: MIR159
source: miRNEST

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTGGATTGAAGGGAGCTCTA

miRNA*
 GAGCTCCTTGAAGTCCAATAG

mismatches: 3
bulges: 0
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pre-miRNA
 TGTGAGGTGTTGTGGTTGAAACCAGTGGAAGTAGAGCTCCTTGAAGTCCAATAGAGGATCTGAGTGGGAAGATAGTGCTGCTGGCTTATGGATTCCTCAA
GTCCTATCTTTATGGTTTTGTATAGGCTTTGTGGCTTGCATAACCCAGGAGCTTTATTACCTTACTTTATGATCTTTTTTTGGATTGAAGGGAGCTCTAC
ACCCTCTATTATTTCTATCCAAACCCCAT

dot-bracket secondary structure
.(((.(((....(((..((((..((((((.((((((((((((..(((((((.((((((((.(((((((..(((((.(((.((((.(((((....((.(((
(.(((((...((......)).))))).)))).))....))))).)))).))).)))))..)))))))...)))))))).)))))))..))))))))))))
....)))))).))))...))).))).)))


SIMILARITIES
miRBase vvi-MIR159c: 0.00000000005

PMRD vvi-miR159c: 0.00000000005

microPC miR159: 1e-79		UniProt no hits

RFAM MIR159: 0.0000000009		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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