ABOUT THIS RECORDspecies: Centaurea solstitialis
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCTTCATCTTCT miRNA* AAGATAGAAGATTCTGTGAAT mismatches: 2 bulges: 2 |
pre-miRNA
CTTCATCATCATCATCATCATCTTCATCTTCTTCTTCTCAACCCATGGATATGCACACCAGCAAATCCTACAAACAATTAGGTATGTTCTCGTTGAGAAA
GAAGATAGAAGATTCTGTGAATCGTGCTGA
dot-bracket secondary structure
..(((.(((.((..((((.((((((((((((((..(((((((....((((.(((......))).)))).(((.((......)).)))....)))))))))
)))))).))))))...)))))).))).)))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTTCATCATCATCATCATCATCTTCATCTTCTTCTTCTCAACCCATGGATATGCACACCAGCAAATCCTACAAACAATTAGGTATGTTCTCGTTGAGAAA
GAAGATAGAAGATTCTGTGAATCGTGCTGA
dot-bracket secondary structure
..(((.(((.((..((((.((((((((((((((..(((((((....((((.(((......))).)))).(((.((......)).)))....)))))))))
)))))).))))))...)))))).))).)))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
