ABOUT THIS RECORDspecies: Cichorium endivia
miRNA family: MIR4341
source: miRNEST
Taxonomy by NCBI:
Cichorium endivia Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGTTGAAAGTTGAACATGA miRNA* ATATTATATTATTGACACATT mismatches: 5 bulges: 0 |
pre-miRNA
GATCATTTTTTTGTGTTGAAAGTTGAACATGATGCATATTATATTATTGACACATTGGGGGAGA
dot-bracket secondary structure
..((..(((..((((((((.(((..((.(((...))).))..))).))))))))..))).))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
GATCATTTTTTTGTGTTGAAAGTTGAACATGATGCATATTATATTATTGACACATTGGGGGAGA
dot-bracket secondary structure
..((..(((..((((((((.(((..((.(((...))).))..))).))))))))..))).))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
