ABOUT THIS RECORDspecies: Artemisia annua
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATAGTACTCCCTCCGTCCCAT miRNA* GGGACGGAGGGAGTAAAAGTG mismatches: 4 bulges: 0 |
pre-miRNA
GTAGTAATAAATAGTACTCCCTCCGTCCCATACAAAAATATTTATGGTCAAAGTTGAAAAAGAAAGACTTTAAAAAGTCAAACAGGACATTTAATATGGG
ACGGAGGGAGTAAAAGTGTAAAACA
dot-bracket secondary structure
.((....)).....((((((((((((((((((..(((...((((.((((....((....))....)))).))))..(((......))).)))..))))))
))))))))))))...((.....)).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTAGTAATAAATAGTACTCCCTCCGTCCCATACAAAAATATTTATGGTCAAAGTTGAAAAAGAAAGACTTTAAAAAGTCAAACAGGACATTTAATATGGG
ACGGAGGGAGTAAAAGTGTAAAACA
dot-bracket secondary structure
.((....)).....((((((((((((((((((..(((...((((.((((....((....))....)))).))))..(((......))).)))..))))))
))))))))))))...((.....)).
SIMILARITIES| miRBase bdi-MIR5164: 0.00002 PMRD osa-miR818d: 0.0001 microPC no hits | UniProt no hits RFAM MIR1122: 0.000007 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
