ABOUT THIS RECORDspecies: Artemisia annua
miRNA family: MIR393
source: miRNEST
Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCAAAGGGATCGCATTGATC miRNA* TCATGCTATCTCTTTGGATT mismatches: 1 bulges: 1 |
pre-miRNA
TCGACGGCAAGTAAAGGAGGCATCCAAAGGGATCGCATTGATCCCAAATCTCATATATCAATAGGTTTGTGTATGTGTATATATAACGAGTTGGGATCAT
GCTATCTCTTTGGATTTCTCCTTCGGTTGCTTCCA
dot-bracket secondary structure
.....(((((...(((((((.((((((((((((.((((.((((((((.((..((((((..(((..........)))..))))))...)).))))))))))
)).)))))))))))).)))))))...)))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCGACGGCAAGTAAAGGAGGCATCCAAAGGGATCGCATTGATCCCAAATCTCATATATCAATAGGTTTGTGTATGTGTATATATAACGAGTTGGGATCAT
GCTATCTCTTTGGATTTCTCCTTCGGTTGCTTCCA
dot-bracket secondary structure
.....(((((...(((((((.((((((((((((.((((.((((((((.((..((((((..(((..........)))..))))))...)).))))))))))
)).)))))))))))).)))))))...)))))....
SIMILARITIES| miRBase gma-MIR393: 0.0000000000001 PMRD gma-miR393: 0.0000000000001 microPC miR393: 4e-47 | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
