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Species belonging to selected taxon:
Brassica napus
ABOUT THIS RECORD
ID:
MNEST000302
species:
Brassica napus
miRNA family:
MIR156
source:
miRNEST
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAAAGAGAGCAC
miRNA*
GCTCTCTTTACTTCTGCCACC
mismatches:
1
bulges:
1
View larger
pre-miRNA
ATGAGAAAATGT
TGACAGAAGAAAGAGAGCAC
AAGCCGGGATTAGCAAAAAGAGAGTTTTGCCCTTGTCGGGAGTGT
GCTCTCTTTACTTCTGCCACC
AT
CATCGCG
dot-bracket secondary structure
....((..(((.
((.(((((((((((((((((
(..((.((....((((((......)))))).....)).))..)))
))))))))).)))))).)).)
))
..))...
SIMILARITIES
miRBase
ath-MIR156h
:
3e-41
PMRD
ath-miR156h
:
3e-41
microPC
miR157
:
5e-34
UniProt
no hits
RFAM
mir-156: 0.000006
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record