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Species belonging to selected taxon:
Brachypodium distachyon
ABOUT THIS RECORD
ID:
MNEST003096
species:
Brachypodium distachyon
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Brachypodium distachyon
Brachypodium
Brachypodieae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTACTCCCTCCGTTCCATA
miRNA*
AGGAACAGAGGTAATAGTAAC
mismatches:
5
bulges:
0
View larger
pre-miRNA
AAGAGATTAAC
TACTACTCCCTCCGTTCCATA
ATATAGGACGATTTGGCAAACTAATTTAGTTTACCAAAACATCTTACATTA
AGGAACAGAGGTAATAG
TAAC
TAGCAAAT
dot-bracket secondary structure
((....))...
(((((...((((.(((((.((
((.(((((...(((((.((((((...)))))).)))))...))))).))))
.))))).))))...)))
))..
........
SIMILARITIES
miRBase
tae-MIR1137
:
0.00002
PMRD
tae-miR1137
:
0.00002
microPC
miR1436
:
0.000005
UniProt
no hits
RFAM
MIR1122: 0.000006
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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