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Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Citrus clementina



ABOUT THIS RECORD

ID: MNEST003125
species: Citrus clementina
miRNA family: MIR168
source: miRNEST

Taxonomy by NCBI:
Citrus clementina Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGCTTGGTGCAGGTCGGGAA

miRNA*
 CCCGCCTTGCATCAACTGAAT

mismatches: 3
bulges: 0
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pre-miRNA
 GATTCAGTTACCGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACTGATTGGCTAGTTTTTTTTTGAAATTTTTTGACAGCGAGGTGGCGTGTTGTAA
TTGGTCGTCACGTTTAAATTAATGATTGAAAAAAATGCGAATTGGATCCCGCCTTGCATCAACTGAATCGGAGACCGAGGTGAGAGATTG

dot-bracket secondary structure
.......(((((..((((((((.(((((.((((((((((.(((((.((((((.((....((((((((((.(((.(((((..(((.((((((.........
...)))))).))))))))..)))..)))))))))).)).)))))).))))).)))))))))).))))).)))))))).))))).......


SIMILARITIES
miRBase crt-MIR168: 7e-56

PMRD rco-miR168: 3e-21

microPC miR168: 1e-32		UniProt no hits

RFAM MIR168: 5e-20		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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