miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Paullinia cupana var. sorbilis, Citrus clementina



ABOUT THIS RECORD

ID: MNEST003136
species: Citrus clementina
miRNA family: MIRf1020
source: miRNEST

Taxonomy by NCBI:
Citrus clementina Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACATGTTTAAACGTTGCAT

miRNA*
 GTAGCGTTATAACGTTCAAT

mismatches: 2
bulges: 1
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pre-miRNA
 ACCTTGTACTATGTAGCGTTATAACGTTCAATCATGGCGACGGAGGTGATGGATCTTCCTCGAAGAACTTGACATGTTTAAACGTTGCATTAAAGTTCT

dot-bracket secondary structure
..(((.....((((((((((..(((((((((......(((.((((((.....)))))).)))......)))).)))))..))))))))))..)))....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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