miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Citrus aurantium
,
Citrus reticulata
,
Citrus sinensis
,
Citrus unshiu
,
Citrus clementina
ABOUT THIS RECORD
ID:
MNEST003140
species:
Citrus clementina
miRNA family:
MIRf380
source:
miRNEST
Taxonomy by NCBI:
Citrus clementina
Citrus
Rutaceae
Sapindales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCGTCGGCGTCATCGTGG
miRNA*
GCGTGCAGCTGAAGAAGGAG
mismatches:
4
bulges:
1
View larger
pre-miRNA
GATCAGAGAACC
GCGTGCAGCTGAAGAAGGAG
CTGAGCCTGATGAACGGGGTGGCGA
TCATCGTCGGCGTCATCGTGG
GCTCGGGGA
dot-bracket secondary structure
..((.(((..((
(((((..(((((.((.((.(
(((..((((.....)))).))))..
)).)).)))))..)).)))))
.)))...))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record