miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST003144
species: Helianthus annuus
miRNA family: MIR2122
source: miRNEST

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTCAAAAAAAACCTTTTGGG

miRNA*
 CAAAAAATTTTTTGAAAAC

mismatches: 2
bulges: 2
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pre-miRNA
 AAAAGGCCCCCATTCTTGTTTTTTCAAAAAAAACCTTTTGGGGGGATTTTTCTCCCGAACCAAAAAAGGTTTTTTTAAAGGGGTTTAAACCCCCCCCCCA
ACCCCTGGTTTTCCTAAGAAACACCCAAAAATTCTTTTTTCCCCCCAAAAAATTTTTTGAAAACCTTAAGGCCGGGAAATCC

dot-bracket secondary structure
........(((..(((((..(((((((((((....(((((((((((...(((....)))...(((((((..(((((..(((((((..............)
))))))(((((((....)))).))).))))).))))))))))))))))))..)))))))))))...)))))..)))......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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