miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus annuus



ABOUT THIS RECORD

ID: MNEST003145
species: Helianthus annuus
miRNA family: MIRf319
source: miRNEST

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GATGAGCTCTTGAAAAGAAAC

miRNA*
 TTATTTTCTTGCTTCTCCA

mismatches: 4
bulges: 2
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pre-miRNA
 CAGTCTACTGCACCGGAGGAAGATGAGCTCTTGAAAAGAAACACCGATTGCGTTTATTTTCTTGCTTCTCCATTAACCTGCAAAAAGGGA

dot-bracket secondary structure
...(((.(((...))).))).((.((((....(((((.((((.........)))).)))))..)))).))......(((......)))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|Q0J952|C3H32_ORYSJ: 0.000003

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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