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Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST003152
species: Helianthus annuus
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCCTGGCTCCCTGTATGCCAT

miRNA*
 GGCGTATGAGGAGCCAAGCAT

mismatches: 2
bulges: 0
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pre-miRNA
 TATAAGTATATGCCTGGCTCCCTGTATGCCATTTCCAGAGCCCACCAGTATCACCGGTGACCTCCGTGAATGGCGTATGAGGAGCCAAGCATATTCCCCA


dot-bracket secondary structure
.......((((((.(((((((.((((((((((((...(((..((((.((...)).))))..)))...)))))))))))).))))))).))))))......



SIMILARITIES
miRBase vvi-MIR160e: 9e-20

PMRD vvi-miR160f: 9e-20

microPC miR160: 4e-19		UniProt no hits

RFAM mir-160: 1e-16		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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