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Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST003153
species: Helianthus annuus
miRNA family: miR160a
source: miRNEST

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCGTATGAGGAGCCAAGCATA

miRNA*
 TGCCTGGCTCCCTGTATGCCA

mismatches: 2
bulges: 0
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pre-miRNA
 GAGTATAAGTATATGCCTGGCTCCCTGTATGCCATTTCCAGAGCCCACCAGTATCACCGGTGACCTCCGTGAATGGCGTATGAGGAGCCAAGCATATTCC
CCATCT

dot-bracket secondary structure
((........((((((.(((((((.((((((((((((...(((..((((.((...)).))))..)))...)))))))))))).))))))).))))))...
...)).


SIMILARITIES
miRBase vvi-MIR160e: 2e-21

PMRD vvi-miR160f: 2e-21

microPC miR160: 4e-19		UniProt no hits

RFAM mir-160: 1e-16		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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