miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST003158
species: Helianthus annuus
miRNA family: MIRf772
source: miRNEST

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTGCTCTCTATGCTTCTGTCA

miRNA*
 ACAGAAGATAGAGAGCACAG

mismatches: 0
bulges: 1
View larger
pre-miRNA
 CGGCCATTAATTAAGAGGAAGAGATTATGATGGATGTTGACAGAAGATAGAGAGCACAGAGAAGCATGAATTGCACATAGATATTGCAATTCACTCCTTC
GTGCTCTCTATGCTTCTGTCATTACCTATTATTTCCTTCTCCCTCTTACTCTAAGAG

dot-bracket secondary structure
...........(((((((.((((...(((((((.((.((((((((((((((((((((.(((.((..(((((((((.........))))))))))).))).
))))))))))).))))))))).)).)))))))....)))).))))))).........


SIMILARITIES
miRBase rco-MIR156h: 0.000000002

PMRD han-miR157a: 2e-43

microPC miR157: 8e-43		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: miR157 from microPC (MNEST045574)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;