ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCTTCTTCT miRNA* AGGAAGAGTCTGTGATCATG mismatches: 5 bulges: 1 |
pre-miRNA
CCCCTTCATCATCATCATCATCATCTTCTTCTATTTGGGTGTTGTCTAACATAAAGCTTCAGTTCTTTGCCCGCATCATAAGGTTTCTCCAATCCAAAGC
AACCAGAAAGCGTTGTGACCCCTCTGATCGGTTTGACACAGCTAAGAGCAGAGTTGAACACAACAACAAGGTTGAAAATCTTGAAACAGTTCACGTTATG
GAGAAGCATAAGGAGGAGGAAGAGTCTGTGATCATGTTGCAGAG
dot-bracket secondary structure
...((.((.(((.(((((.....(((((((((...((((((....((.............)).....))))))..((.....(((((((((...(((..(
((((.......((((((....(((((.((((((......))))..)).))))).....)))))).....)))))......))).(((.......))).))
))))))).....)))))))))))....))))).))).)).))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
download this record
CCCCTTCATCATCATCATCATCATCTTCTTCTATTTGGGTGTTGTCTAACATAAAGCTTCAGTTCTTTGCCCGCATCATAAGGTTTCTCCAATCCAAAGC
AACCAGAAAGCGTTGTGACCCCTCTGATCGGTTTGACACAGCTAAGAGCAGAGTTGAACACAACAACAAGGTTGAAAATCTTGAAACAGTTCACGTTATG
GAGAAGCATAAGGAGGAGGAAGAGTCTGTGATCATGTTGCAGAG
dot-bracket secondary structure
...((.((.(((.(((((.....(((((((((...((((((....((.............)).....))))))..((.....(((((((((...(((..(
((((.......((((((....(((((.((((((......))))..)).))))).....)))))).....)))))......))).(((.......))).))
))))))).....)))))))))))....))))).))).)).))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
download this record
