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Species belonging to selected taxon:
Mus musculus
,
Sus scrofa
,
Bos taurus
,
Rattus norvegicus
,
Xenopus laevis
,
Gallus gallus
,
Canis lupus familiaris
,
Ovis aries
,
Macaca fascicularis
,
Anolis carolinensis
,
Trichosurus vulpecula
,
Papio anubis
,
Homo sapiens
,
Taeniopygia guttata
,
Peromyscus maniculatus bairdii
,
Pongo abelii
,
Ursus americanus
,
Equus caballus
,
Oryctolagus cuniculus
,
Macaca nemestrina
,
Rana catesbeiana
,
Cynops pyrrhogaster
,
Ambystoma tigrinum tigrinum
,
Cavia porcellus
,
Bos indicus
,
Meleagris gallopavo
,
Lonchura striata domestica
,
Bos sp.
,
Macropus eugenii
,
Peromyscus polionotus subgriseus
,
Capra hircus
,
Pan troglodytes verus
,
Macaca mulatta
ABOUT THIS RECORD
ID:
MNEST032390
species:
Mus musculus
miRNA family:
mir-1195
source:
miRBase, original name:
mmu-mir-1195
(
MI0006303
)
Taxonomy by NCBI:
Mus musculus
Mus
Mus
Murinae
Muridae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAGTTCGAGGCCAGCCTGCTCA
miRNA*
AGTTCTAGGGCAGCCAGGAACACACA
mismatches:
4
bulges:
5
View larger
pre-miRNA
TAGAGGCAGGCAGATCTCTG
TGAGTTCGAGGCCAGCCTGCTCA
ACAGAATG
AGTTCTAGGGCAGCCAGGAACACACA
GAGAAACCCTGTCTCAAGAAGGT
AAAAAGTAAAAAAAAAAAAAAAA
dot-bracket secondary structure
..((((((((....((((((
((.((((..(((..(((((((((
......))
)))....)))).)))..)))).))))
))))...))))))))........
.......................
SIMILARITIES
miRBase
mmu-mir-3470a
:
0.00002
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
7SK: 0.000007
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Calabrese JM, Seila AC, Yeo GW, Sharp PA,
Proc Natl Acad Sci U S A. 104:18097-18102(2007).
,
"RNA sequence analysis defines Dicer's role in mouse embryonic stem cells"