ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-2182
source: miRBase, original name: mmu-mir-2182 (MI0010832)
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACGCCACATTTCCCACGCCGCG miRNA* CGGCGGGGATTCGGCGCTG mismatches: 4 bulges: 3 |
pre-miRNA
CCCCACGAGCGGCGCCGGGGAGTGGGTCTTCCGTACGCCACATTTCCCACGCCGCGACGCGCGGCGGGGATTCGGCGCTGGGCTCTTCCCTGTTCACTCG
CCGTTACTGAGGGAAT
dot-bracket secondary structure
(((((..(((((((.(((((((.((((((......((((.....((((.(((((((...)))))))))))...))))..)))))))))))))......))
)))))..)).)))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Sdassi N, Silveri L, Laubier J, Tilly G, Costa J, Layani S, Vilotte JL, Le Provost F, BMC Genomics. 10:149(2009)., "Identification and characterization of new miRNAs cloned from normal mouse mammary gland"
CCCCACGAGCGGCGCCGGGGAGTGGGTCTTCCGTACGCCACATTTCCCACGCCGCGACGCGCGGCGGGGATTCGGCGCTGGGCTCTTCCCTGTTCACTCG
CCGTTACTGAGGGAAT
dot-bracket secondary structure
(((((..(((((((.(((((((.((((((......((((.....((((.(((((((...)))))))))))...))))..)))))))))))))......))
)))))..)).)))...
SIMILARITIES| miRBase mmu-mir-5105: 0.000001 PMRD no hits microPC no hits | UniProt no hits RFAM SSU_rRNA_eukarya: 2e-24 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Sdassi N, Silveri L, Laubier J, Tilly G, Costa J, Layani S, Vilotte JL, Le Provost F, BMC Genomics. 10:149(2009)., "Identification and characterization of new miRNAs cloned from normal mouse mammary gland"
